BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A01LP1|AL427691
(550 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1570 489 e-138
3x_Contig965 170 3e-42
>3x_Contig1570
Length = 12233
Score = 489 bits (242), Expect = e-138
Identities = 248/252 (98%)
Strand = Plus / Plus
Query: 299 gcgtagtgacattattcacacacaaattagaatcatctcatgctcaaaatcttctaacgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9 gcgtagtgacattattcacacacaaattagaatcatctcatgctcaaaatcttataacgg 68
Query: 359 cattaawatcgaaccacaagaacaaaatcaacattgaaatatgccagadattccctacta 418
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69 cattaaaatcgaaccacaagaacaaaatcaacattgaaatatgccagaaattccctacta 128
Query: 419 gagatcaattggaatatttggcaaaaattgataagcccgacttaatggaacagattccta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gagatcaattggaatatttggcaaaaattgataagcccgacttaatggaacagattccta 188
Query: 479 agacggaatctcttttgaaaaaagctgctgaggatccactatttgggtcaccattgcaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agacggaatctcttttgaaaaaagctgctgaggatccactatttgggtcaccattgcaga 248
Query: 539 watgtgtcgaga 550
|||||||||||
Sbjct: 249 aatgtgtcgaga 260
>3x_Contig965
Length = 2571
Score = 170 bits (84), Expect = 3e-42
Identities = 151/176 (85%)
Strand = Plus / Minus
Query: 12 cgtcatgactccgtatcatagtattgrttgctgggttttccggggttttgtttccctgcc 71
|||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||
Sbjct: 262 cgtcatgactccgtatcatagtattgattgctggattttccgggattttgtttccctgcc 203
Query: 72 atgcgtatttgrgggatartggtgtggtttccaasstgtccatgtttcgsrggtgtctta 131
||||||||||| |||||| | || || ||||||| ||| ||| |||| | |||||||
Sbjct: 202 atgcgtatttgagggataatagtatgatttccaaaatgtacatatttcaaagatgtctta 143
Query: 132 ttttggtattgcgtatatsggggcggcgacgattactggggtgacctggcttaatt 187
||| ||||||||||||| ||| || || ||||||||||||||||| |||||||
Sbjct: 142 atttagtattgcgtatataaaggcagcaacaattactggggtgacctgacttaatt 87
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3087
Number of Sequences: 1807
Number of extensions: 3087
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 2
length of query: 550
length of database: 10,358,551
effective HSP length: 16
effective length of query: 534
effective length of database: 10,329,639
effective search space: 5516027226
effective search space used: 5516027226
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)